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wheel-diagram

Plot wheel diagram for alpha-helix.

DEMO

Demonstration for a sequence “LEQLEQDCNDICERMKNVEKDFSN” from formin Fus1 in Schizosaccharomyces pombe.
Demo

Features

The Kyte and Doolittle’s hydrophobicity is used.
The hydrophobic moment is normalized by the sequence length.

Requirement (validated version)

Installation

Copy plot_wheel_diagram.py to wherever you like.

Usage

python plot_wheel_diagram.py YOUR_SEQUENCE

Web version is also available here.

Note

Helvetica is specified for default font.
If you have an error, remove font specification.

HTML version is available on the index.html.

Author

License

This script is under MIT license.